Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.34□□□□□ -0.27
Cd9P40240 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cd9P40240 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.34□□□□□ -0.27
Cd9P40240 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd9P40240 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd9P40240 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cd9P40240 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd9P40240 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Cd9P40240 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cd9P40240 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd9P40240 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.33□□□□□ -0.28
Cd9P40240 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.33□□□□□ -0.28
Cd9P40240 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cd9P40240 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cd9P40240 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cd9P40240 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cd9P40240 Auts2-212ENSMUST00000178555 309 ntBASIC13.33□□□□□ -0.28
Cd9P40240 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd9P40240 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.33□□□□□ -0.28
Cd9P40240 Gm42550-201ENSMUST00000201553 960 ntBASIC13.33□□□□□ -0.28
Cd9P40240 Gm6218-201ENSMUST00000219812 628 ntBASIC13.33□□□□□ -0.28
Cd9P40240 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Cd9P40240 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cd9P40240 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.33□□□□□ -0.28
Cd9P40240 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd9P40240 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cd9P40240 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd9P40240 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cd9P40240 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.32□□□□□ -0.28
Cd9P40240 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Gm15371-201ENSMUST00000117057 784 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Gm12341-201ENSMUST00000119724 503 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Mir7654-201ENSMUST00000185082 70 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Gm44855-201ENSMUST00000205725 362 ntBASIC13.32□□□□□ -0.28
Cd9P40240 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Grk6-205ENSMUST00000224653 2976 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd9P40240 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.32□□□□□ -0.28
Cd9P40240 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cd9P40240 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms