Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm11331-201ENSMUST00000119764 288 ntBASIC13.85□□□□□ -0.19
Cxcl12P40224 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl12P40224 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.85□□□□□ -0.19
Cxcl12P40224 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.85□□□□□ -0.19
Cxcl12P40224 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.85□□□□□ -0.19
Cxcl12P40224 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Cxcl12P40224 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.85□□□□□ -0.19
Cxcl12P40224 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cxcl12P40224 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cxcl12P40224 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Gm23270-201ENSMUST00000104055 131 ntBASIC13.84□□□□□ -0.19
Cxcl12P40224 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Gm27023-201ENSMUST00000182372 285 ntBASIC13.84□□□□□ -0.19
Cxcl12P40224 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.84□□□□□ -0.19
Cxcl12P40224 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl12P40224 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl12P40224 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.83□□□□□ -0.19
Cxcl12P40224 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Cxcl12P40224 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.83□□□□□ -0.2
Cxcl12P40224 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl12P40224 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl12P40224 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms