Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Upk2P38575 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Upk2P38575 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.88□□□□□ -0.51
Upk2P38575 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Upk2P38575 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Upk2P38575 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Upk2P38575 Gm22189-201ENSMUST00000103822 86 ntBASIC11.87□□□□□ -0.51
Upk2P38575 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.87□□□□□ -0.51
Upk2P38575 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.87□□□□□ -0.51
Upk2P38575 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Gm12485-201ENSMUST00000119641 291 ntBASIC11.87□□□□□ -0.51
Upk2P38575 Gm14057-201ENSMUST00000120631 482 ntBASIC11.87□□□□□ -0.51
Upk2P38575 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.87□□□□□ -0.51
Upk2P38575 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.87□□□□□ -0.51
Upk2P38575 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.87□□□□□ -0.51
Upk2P38575 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Upk2P38575 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.87□□□□□ -0.51
Upk2P38575 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Upk2P38575 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.87□□□□□ -0.51
Upk2P38575 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Upk2P38575 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.87□□□□□ -0.51
Upk2P38575 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Upk2P38575 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk2P38575 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk2P38575 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.86□□□□□ -0.51
Upk2P38575 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Upk2P38575 Gm15678-201ENSMUST00000117573 960 ntBASIC11.86□□□□□ -0.51
Upk2P38575 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Upk2P38575 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.86□□□□□ -0.51
Upk2P38575 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk2P38575 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk2P38575 Gm19078-201ENSMUST00000206311 727 ntBASIC11.86□□□□□ -0.51
Upk2P38575 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.86□□□□□ -0.51
Upk2P38575 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Upk2P38575 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms