Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
HmgclP38060 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HmgclP38060 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.34□□□□□ -0.27
HmgclP38060 Gm12341-201ENSMUST00000119724 503 ntBASIC13.34□□□□□ -0.27
HmgclP38060 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.34□□□□□ -0.27
HmgclP38060 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.34□□□□□ -0.27
HmgclP38060 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.34□□□□□ -0.27
HmgclP38060 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.34□□□□□ -0.27
HmgclP38060 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.34□□□□□ -0.27
HmgclP38060 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HmgclP38060 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.34□□□□□ -0.27
HmgclP38060 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.34□□□□□ -0.27
HmgclP38060 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HmgclP38060 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HmgclP38060 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HmgclP38060 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HmgclP38060 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HmgclP38060 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HmgclP38060 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.33□□□□□ -0.28
HmgclP38060 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HmgclP38060 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.33□□□□□ -0.28
HmgclP38060 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.33□□□□□ -0.28
HmgclP38060 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.33□□□□□ -0.28
HmgclP38060 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.33□□□□□ -0.28
HmgclP38060 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HmgclP38060 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.33□□□□□ -0.28
HmgclP38060 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HmgclP38060 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.33□□□□□ -0.28
HmgclP38060 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.33□□□□□ -0.28
HmgclP38060 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
HmgclP38060 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.33□□□□□ -0.28
HmgclP38060 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HmgclP38060 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HmgclP38060 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HmgclP38060 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Gm15678-201ENSMUST00000117573 960 ntBASIC13.32□□□□□ -0.28
HmgclP38060 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HmgclP38060 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HmgclP38060 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms