Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.5□□□□□ -0.25
LdlrP35951 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LdlrP35951 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
LdlrP35951 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.5□□□□□ -0.25
LdlrP35951 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.5□□□□□ -0.25
LdlrP35951 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.5□□□□□ -0.25
LdlrP35951 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LdlrP35951 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.5□□□□□ -0.25
LdlrP35951 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Mir125a-201ENSMUST00000083545 68 ntBASIC13.5□□□□□ -0.25
LdlrP35951 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.5□□□□□ -0.25
LdlrP35951 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LdlrP35951 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.5□□□□□ -0.25
LdlrP35951 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LdlrP35951 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.49□□□□□ -0.25
LdlrP35951 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LdlrP35951 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LdlrP35951 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Gm12490-201ENSMUST00000120255 560 ntBASIC13.49□□□□□ -0.25
LdlrP35951 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
LdlrP35951 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LdlrP35951 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.49□□□□□ -0.25
LdlrP35951 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.49□□□□□ -0.25
LdlrP35951 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.49□□□□□ -0.25
LdlrP35951 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.49□□□□□ -0.25
LdlrP35951 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LdlrP35951 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LdlrP35951 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LdlrP35951 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LdlrP35951 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.48□□□□□ -0.25
LdlrP35951 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LdlrP35951 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LdlrP35951 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.48□□□□□ -0.25
LdlrP35951 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.48□□□□□ -0.25
LdlrP35951 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.48□□□□□ -0.25
LdlrP35951 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Gm27533-201ENSMUST00000183800 152 ntBASIC13.48□□□□□ -0.25
LdlrP35951 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.48□□□□□ -0.25
LdlrP35951 Gm28631-201ENSMUST00000190740 334 ntBASIC13.48□□□□□ -0.25
LdlrP35951 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LdlrP35951 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.48□□□□□ -0.25
LdlrP35951 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms