Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm15427-201ENSMUST00000117288 531 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfc1P35601 Rpph1-201ENSMUST00000175096 319 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfc1P35601 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rfc1P35601 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfc1P35601 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.26□□□□□ -0.13
Rfc1P35601 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc1P35601 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Rfc1P35601 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfc1P35601 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rfc1P35601 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfc1P35601 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rfc1P35601 Gm11779-201ENSMUST00000118541 368 ntBASIC14.25□□□□□ -0.13
Rfc1P35601 AW822252-206ENSMUST00000208904 237 ntBASIC14.25□□□□□ -0.13
Rfc1P35601 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfc1P35601 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rfc1P35601 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfc1P35601 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfc1P35601 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc1P35601 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.24□□□□□ -0.13
Rfc1P35601 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Syt7-205ENSMUST00000224135 1557 ntBASIC14.24□□□□□ -0.13
Rfc1P35601 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfc1P35601 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc1P35601 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Rfc1P35601 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms