Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc5P32043 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc5P32043 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Gm15393-201ENSMUST00000120499 219 ntBASIC12.58□□□□□ -0.4
Hoxc5P32043 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Gm43703-201ENSMUST00000200523 763 ntBASIC12.58□□□□□ -0.4
Hoxc5P32043 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.58□□□□□ -0.4
Hoxc5P32043 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hoxc5P32043 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hoxc5P32043 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc5P32043 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc5P32043 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm13223-201ENSMUST00000118609 747 ntBASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm13616-201ENSMUST00000120600 222 ntBASIC12.57□□□□□ -0.4
Hoxc5P32043 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.57□□□□□ -0.4
Hoxc5P32043 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.57□□□□□ -0.4
Hoxc5P32043 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc5P32043 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc5P32043 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.56□□□□□ -0.4
Hoxc5P32043 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc5P32043 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc5P32043 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc5P32043 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc5P32043 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc5P32043 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc5P32043 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc5P32043 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms