Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.28□□□□□ -0.44
VtnP29788 Gm15770-201ENSMUST00000117498 584 ntBASIC12.28□□□□□ -0.44
VtnP29788 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.28□□□□□ -0.44
VtnP29788 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.28□□□□□ -0.44
VtnP29788 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.28□□□□□ -0.44
VtnP29788 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Gm5354-201ENSMUST00000182417 973 ntBASIC12.28□□□□□ -0.44
VtnP29788 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VtnP29788 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.28□□□□□ -0.44
VtnP29788 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
VtnP29788 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VtnP29788 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
VtnP29788 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.27□□□□□ -0.44
VtnP29788 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.27□□□□□ -0.44
VtnP29788 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.27□□□□□ -0.44
VtnP29788 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VtnP29788 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.27□□□□□ -0.45
VtnP29788 Gm12341-201ENSMUST00000119724 503 ntBASIC12.27□□□□□ -0.45
VtnP29788 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.27□□□□□ -0.45
VtnP29788 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.27□□□□□ -0.45
VtnP29788 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
VtnP29788 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.27□□□□□ -0.45
VtnP29788 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.27□□□□□ -0.45
VtnP29788 Gm19220-201ENSMUST00000222682 803 ntBASIC12.27□□□□□ -0.45
VtnP29788 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
VtnP29788 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
VtnP29788 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VtnP29788 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
VtnP29788 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Gm12485-201ENSMUST00000119641 291 ntBASIC12.26□□□□□ -0.45
VtnP29788 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.26□□□□□ -0.45
VtnP29788 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VtnP29788 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.26□□□□□ -0.45
VtnP29788 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.26□□□□□ -0.45
VtnP29788 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.26□□□□□ -0.45
VtnP29788 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.26□□□□□ -0.45
VtnP29788 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
VtnP29788 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.26□□□□□ -0.45
VtnP29788 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
VtnP29788 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms