Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Vcam1P29533 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.47■□□□□ 0.07
Vcam1P29533 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.47■□□□□ 0.07
Vcam1P29533 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.47■□□□□ 0.07
Vcam1P29533 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.47■□□□□ 0.07
Vcam1P29533 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.47■□□□□ 0.07
Vcam1P29533 Gm38158-201ENSMUST00000194617 339 ntBASIC15.47■□□□□ 0.07
Vcam1P29533 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.47■□□□□ 0.07
Vcam1P29533 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.47■□□□□ 0.07
Vcam1P29533 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Vcam1P29533 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.47■□□□□ 0.07
Vcam1P29533 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.47■□□□□ 0.07
Vcam1P29533 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Vcam1P29533 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vcam1P29533 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 Gm16379-201ENSMUST00000161469 348 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Gm8762-201ENSMUST00000193486 339 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 Olfr284-202ENSMUST00000206647 966 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.46■□□□□ 0.07
Vcam1P29533 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vcam1P29533 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vcam1P29533 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vcam1P29533 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vcam1P29533 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vcam1P29533 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
Vcam1P29533 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vcam1P29533 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vcam1P29533 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.45■□□□□ 0.06
Vcam1P29533 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.45■□□□□ 0.06
Vcam1P29533 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.45■□□□□ 0.06
Vcam1P29533 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vcam1P29533 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Vcam1P29533 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.45■□□□□ 0.06
Vcam1P29533 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Vcam1P29533 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.45■□□□□ 0.06
Vcam1P29533 Gm42627-201ENSMUST00000197347 224 ntBASIC15.45■□□□□ 0.06
Vcam1P29533 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.45■□□□□ 0.06
Vcam1P29533 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vcam1P29533 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vcam1P29533 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vcam1P29533 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms