Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.44□□□□□ -0.1
Mmp3P28862 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.44□□□□□ -0.1
Mmp3P28862 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Gm10146-201ENSMUST00000072739 309 ntBASIC14.44□□□□□ -0.1
Mmp3P28862 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Mmp3P28862 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Mmp3P28862 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.43□□□□□ -0.1
Mmp3P28862 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mmp3P28862 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mmp3P28862 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.43□□□□□ -0.1
Mmp3P28862 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.43□□□□□ -0.1
Mmp3P28862 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.43□□□□□ -0.1
Mmp3P28862 Gm7029-201ENSMUST00000173226 450 ntBASIC14.43□□□□□ -0.1
Mmp3P28862 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mmp3P28862 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.43□□□□□ -0.1
Mmp3P28862 Gm44069-201ENSMUST00000204898 506 ntBASIC14.43□□□□□ -0.1
Mmp3P28862 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.43□□□□□ -0.1
Mmp3P28862 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mmp3P28862 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mmp3P28862 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.43□□□□□ -0.1
Mmp3P28862 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.43□□□□□ -0.1
Mmp3P28862 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Mmp3P28862 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp3P28862 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.42□□□□□ -0.1
Mmp3P28862 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Mmp3P28862 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.42□□□□□ -0.1
Mmp3P28862 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp3P28862 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Gm16202-201ENSMUST00000117532 544 ntBASIC14.42□□□□□ -0.1
Mmp3P28862 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Gm18054-201ENSMUST00000207539 555 ntBASIC14.42□□□□□ -0.1
Mmp3P28862 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp3P28862 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp3P28862 Gm10268-201ENSMUST00000085340 555 ntBASIC14.42□□□□□ -0.1
Mmp3P28862 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Mmp3P28862 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Mmp3P28862 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp3P28862 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Mmp3P28862 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms