Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Gm17330-201ENSMUST00000221047 165 ntBASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Gm24447-201ENSMUST00000083977 338 ntBASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1bP25119 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm9908-201ENSMUST00000211534 448 ntBASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1bP25119 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1bP25119 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1bP25119 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1bP25119 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1bP25119 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1bP25119 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf1bP25119 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1bP25119 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms