Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.79□□□□□ -0.04
Pde6bP23440 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6bP23440 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.78□□□□□ -0.04
Pde6bP23440 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.78□□□□□ -0.04
Pde6bP23440 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.78□□□□□ -0.04
Pde6bP23440 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.78□□□□□ -0.04
Pde6bP23440 Gm17420-201ENSMUST00000164753 153 ntBASIC14.78□□□□□ -0.04
Pde6bP23440 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.78□□□□□ -0.04
Pde6bP23440 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.78□□□□□ -0.04
Pde6bP23440 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Gm5161-201ENSMUST00000075243 853 ntBASIC14.78□□□□□ -0.04
Pde6bP23440 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.78□□□□□ -0.04
Pde6bP23440 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6bP23440 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pde6bP23440 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pde6bP23440 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.77□□□□□ -0.04
Pde6bP23440 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pde6bP23440 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.77□□□□□ -0.04
Pde6bP23440 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pde6bP23440 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pde6bP23440 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pde6bP23440 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6bP23440 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Pde6bP23440 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Gm8062-201ENSMUST00000139696 444 ntBASIC14.77□□□□□ -0.05
Pde6bP23440 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.77□□□□□ -0.05
Pde6bP23440 Gm29127-201ENSMUST00000188304 517 ntBASIC14.77□□□□□ -0.05
Pde6bP23440 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Gm37424-201ENSMUST00000191727 561 ntBASIC14.77□□□□□ -0.05
Pde6bP23440 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.77□□□□□ -0.05
Pde6bP23440 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.77□□□□□ -0.05
Pde6bP23440 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.77□□□□□ -0.05
Pde6bP23440 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pde6bP23440 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Pde6bP23440 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.77□□□□□ -0.05
Pde6bP23440 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6bP23440 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pde6bP23440 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6bP23440 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pde6bP23440 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.76□□□□□ -0.05
Pde6bP23440 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms