Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.69□□□□□ -0.38
Clk1P22518 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.69□□□□□ -0.38
Clk1P22518 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Clk1P22518 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clk1P22518 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.68□□□□□ -0.38
Clk1P22518 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Clk1P22518 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.68□□□□□ -0.38
Clk1P22518 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clk1P22518 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clk1P22518 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.68□□□□□ -0.38
Clk1P22518 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Clk1P22518 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Clk1P22518 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.67□□□□□ -0.38
Clk1P22518 Gm9063-201ENSMUST00000223299 582 ntBASIC12.67□□□□□ -0.38
Clk1P22518 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clk1P22518 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clk1P22518 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clk1P22518 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clk1P22518 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms