Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TP20293 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.77□□□□□ -0.37
TP20293 Gm15321-201ENSMUST00000121290 288 ntBASIC12.77□□□□□ -0.37
TP20293 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.77□□□□□ -0.37
TP20293 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.77□□□□□ -0.37
TP20293 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TP20293 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TP20293 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.77□□□□□ -0.37
TP20293 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.77□□□□□ -0.37
TP20293 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.77□□□□□ -0.37
TP20293 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TP20293 Syt7-204ENSMUST00000223586 1344 ntBASIC12.77□□□□□ -0.37
TP20293 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TP20293 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TP20293 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TP20293 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
TP20293 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TP20293 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
TP20293 Mir698-201ENSMUST00000102164 109 ntBASIC12.76□□□□□ -0.37
TP20293 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.76□□□□□ -0.37
TP20293 Gm21854-201ENSMUST00000179901 471 ntBASIC12.76□□□□□ -0.37
TP20293 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TP20293 Gm9522-201ENSMUST00000182394 926 ntBASIC12.76□□□□□ -0.37
TP20293 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.76□□□□□ -0.37
TP20293 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.76□□□□□ -0.37
TP20293 Gm20445-201ENSMUST00000061905 565 ntBASIC12.76□□□□□ -0.37
TP20293 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.76□□□□□ -0.37
TP20293 Mir497b-201ENSMUST00000093601 125 ntBASIC12.76□□□□□ -0.37
TP20293 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TP20293 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TP20293 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TP20293 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TP20293 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.76□□□□□ -0.37
TP20293 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TP20293 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TP20293 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.76□□□□□ -0.37
TP20293 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TP20293 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TP20293 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
TP20293 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TP20293 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TP20293 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TP20293 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TP20293 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TP20293 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TP20293 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TP20293 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TP20293 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TP20293 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TP20293 Gm15240-201ENSMUST00000118156 720 ntBASIC12.75□□□□□ -0.37
TP20293 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.75□□□□□ -0.37
TP20293 Gm13385-201ENSMUST00000121089 220 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms