Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Fv4P11370 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Fv4P11370 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Fv4P11370 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.1□□□□□ -0.31
Fv4P11370 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Fv4P11370 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Fv4P11370 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Fv4P11370 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Fv4P11370 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.1□□□□□ -0.31
Fv4P11370 Gm27772-201ENSMUST00000184900 187 ntBASIC13.1□□□□□ -0.31
Fv4P11370 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.1□□□□□ -0.31
Fv4P11370 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.1□□□□□ -0.31
Fv4P11370 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.1□□□□□ -0.31
Fv4P11370 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.1□□□□□ -0.31
Fv4P11370 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.1□□□□□ -0.31
Fv4P11370 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.1□□□□□ -0.31
Fv4P11370 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.1□□□□□ -0.31
Fv4P11370 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Fv4P11370 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fv4P11370 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.09□□□□□ -0.31
Fv4P11370 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Fv4P11370 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Fv4P11370 Gm4875-201ENSMUST00000118257 786 ntBASIC13.09□□□□□ -0.31
Fv4P11370 Gm13223-201ENSMUST00000118609 747 ntBASIC13.09□□□□□ -0.31
Fv4P11370 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.09□□□□□ -0.31
Fv4P11370 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.09□□□□□ -0.31
Fv4P11370 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.09□□□□□ -0.31
Fv4P11370 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.09□□□□□ -0.31
Fv4P11370 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.09□□□□□ -0.31
Fv4P11370 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.09□□□□□ -0.31
Fv4P11370 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fv4P11370 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.09□□□□□ -0.31
Fv4P11370 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fv4P11370 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fv4P11370 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fv4P11370 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fv4P11370 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fv4P11370 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fv4P11370 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Fv4P11370 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.08□□□□□ -0.32
Fv4P11370 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fv4P11370 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fv4P11370 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fv4P11370 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fv4P11370 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Fv4P11370 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.08□□□□□ -0.32
Fv4P11370 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.08□□□□□ -0.32
Fv4P11370 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fv4P11370 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms