Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.91□□□□□ -0.5
Ccl3P10855 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.9□□□□□ -0.5
Ccl3P10855 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccl3P10855 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccl3P10855 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccl3P10855 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Gm16479-201ENSMUST00000121706 932 ntBASIC11.9□□□□□ -0.5
Ccl3P10855 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Gm7809-201ENSMUST00000153199 742 ntBASIC11.9□□□□□ -0.5
Ccl3P10855 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccl3P10855 Gm37489-201ENSMUST00000191883 159 ntBASIC11.9□□□□□ -0.5
Ccl3P10855 Gm6621-201ENSMUST00000193251 772 ntBASIC11.9□□□□□ -0.5
Ccl3P10855 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.9□□□□□ -0.5
Ccl3P10855 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Ccl3P10855 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccl3P10855 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccl3P10855 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl3P10855 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Ccl3P10855 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccl3P10855 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccl3P10855 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccl3P10855 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccl3P10855 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccl3P10855 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Gm27320-201ENSMUST00000184892 109 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Gm29199-201ENSMUST00000187766 775 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccl3P10855 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccl3P10855 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccl3P10855 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccl3P10855 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccl3P10855 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccl3P10855 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms