Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.41■□□□□ 0.38
Hoxc9P09633 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.4■□□□□ 0.38
Hoxc9P09633 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm17376-201ENSMUST00000166016 84 ntBASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm18584-201ENSMUST00000203098 964 ntBASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm21769-201ENSMUST00000211922 111 ntBASIC17.4■□□□□ 0.38
Hoxc9P09633 Gm32025-201ENSMUST00000217960 307 ntBASIC17.4■□□□□ 0.38
Hoxc9P09633 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.4■□□□□ 0.38
Hoxc9P09633 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hoxc9P09633 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc9P09633 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.39■□□□□ 0.38
Hoxc9P09633 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxc9P09633 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxc9P09633 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.39■□□□□ 0.37
Hoxc9P09633 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.39■□□□□ 0.37
Hoxc9P09633 Gm29199-201ENSMUST00000187766 775 ntBASIC17.39■□□□□ 0.37
Hoxc9P09633 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.39■□□□□ 0.37
Hoxc9P09633 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Hoxc9P09633 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc9P09633 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hoxc9P09633 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hoxc9P09633 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc9P09633 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms