Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm8213-201ENSMUST00000118191 441 ntBASIC20.06■□□□□ 0.8
NclP09405 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Snora78-201ENSMUST00000158630 128 ntBASIC20.06■□□□□ 0.8
NclP09405 Proscos-202ENSMUST00000178990 666 ntBASIC20.06■□□□□ 0.8
NclP09405 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.06■□□□□ 0.8
NclP09405 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NclP09405 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NclP09405 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NclP09405 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC20.05■□□□□ 0.8
NclP09405 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC20.05■□□□□ 0.8
NclP09405 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NclP09405 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC20.05■□□□□ 0.8
NclP09405 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NclP09405 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NclP09405 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
NclP09405 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.04■□□□□ 0.8
NclP09405 Gm10156-201ENSMUST00000122364 462 ntBASIC20.04■□□□□ 0.8
NclP09405 Gm8810-201ENSMUST00000172895 754 ntBASIC20.04■□□□□ 0.8
NclP09405 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NclP09405 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC20.04■□□□□ 0.8
NclP09405 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NclP09405 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC20.03■□□□□ 0.8
NclP09405 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.03■□□□□ 0.8
NclP09405 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NclP09405 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NclP09405 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
NclP09405 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC20.02■□□□□ 0.8
NclP09405 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC20.02■□□□□ 0.8
NclP09405 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Acot6-202ENSMUST00000222921 3622 ntBASIC20.02■□□□□ 0.8
NclP09405 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.02■□□□□ 0.8
NclP09405 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.02■□□□□ 0.8
NclP09405 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC20.02■□□□□ 0.8
NclP09405 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.02■□□□□ 0.8
NclP09405 Gm43818-201ENSMUST00000200605 466 ntBASIC20.02■□□□□ 0.8
NclP09405 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.02■□□□□ 0.8
NclP09405 Gm3695-201ENSMUST00000087222 1009 ntBASIC20.02■□□□□ 0.8
NclP09405 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms