Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sod1P08228 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Mir877-201ENSMUST00000104738 85 ntBASIC12.62□□□□□ -0.39
Sod1P08228 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.62□□□□□ -0.39
Sod1P08228 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.62□□□□□ -0.39
Sod1P08228 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.62□□□□□ -0.39
Sod1P08228 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.62□□□□□ -0.39
Sod1P08228 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Gm18827-201ENSMUST00000188341 790 ntBASIC12.62□□□□□ -0.39
Sod1P08228 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.62□□□□□ -0.39
Sod1P08228 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.62□□□□□ -0.39
Sod1P08228 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sod1P08228 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
Sod1P08228 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Sod1P08228 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sod1P08228 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sod1P08228 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sod1P08228 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.61□□□□□ -0.39
Sod1P08228 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.61□□□□□ -0.39
Sod1P08228 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.61□□□□□ -0.39
Sod1P08228 Gm32025-201ENSMUST00000217960 307 ntBASIC12.61□□□□□ -0.39
Sod1P08228 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.61□□□□□ -0.39
Sod1P08228 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.61□□□□□ -0.39
Sod1P08228 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sod1P08228 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Sod1P08228 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sod1P08228 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.61□□□□□ -0.39
Sod1P08228 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sod1P08228 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sod1P08228 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.61□□□□□ -0.39
Sod1P08228 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.6□□□□□ -0.39
Sod1P08228 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Gm14381-201ENSMUST00000122105 414 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Gm27320-201ENSMUST00000184892 109 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Gm29199-201ENSMUST00000187766 775 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.6□□□□□ -0.39
Sod1P08228 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.6□□□□□ -0.39
Sod1P08228 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Morn2-202ENSMUST00000227729 656 ntBASIC12.6□□□□□ -0.39
Sod1P08228 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.6□□□□□ -0.39
Sod1P08228 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sod1P08228 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms