Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igh-VJ558P01758 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igh-VJ558P01758 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Gm42612-201ENSMUST00000197986 623 ntBASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Gm43170-201ENSMUST00000199827 612 ntBASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Syt7-205ENSMUST00000224135 1557 ntBASIC11.7□□□□□ -0.54
Igh-VJ558P01758 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igh-VJ558P01758 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igh-VJ558P01758 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igh-VJ558P01758 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.68□□□□□ -0.54
Igh-VJ558P01758 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms