Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P01728 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
P01728 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.6□□□□□ -0.71
P01728 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
P01728 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P01728 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P01728 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P01728 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.6□□□□□ -0.71
P01728 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P01728 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01728 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.59□□□□□ -0.71
P01728 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.59□□□□□ -0.71
P01728 Gm13015-201ENSMUST00000118674 204 ntBASIC10.59□□□□□ -0.71
P01728 Gm1401-201ENSMUST00000122048 772 ntBASIC10.59□□□□□ -0.71
P01728 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.59□□□□□ -0.71
P01728 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
P01728 Gm38225-201ENSMUST00000194001 393 ntBASIC10.59□□□□□ -0.71
P01728 Gm2651-201ENSMUST00000203560 838 ntBASIC10.59□□□□□ -0.71
P01728 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.59□□□□□ -0.71
P01728 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01728 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
P01728 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01728 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.59□□□□□ -0.71
P01728 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.59□□□□□ -0.71
P01728 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P01728 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01728 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.58□□□□□ -0.71
P01728 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P01728 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.58□□□□□ -0.72
P01728 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.58□□□□□ -0.72
P01728 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01728 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01728 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01728 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
P01728 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.58□□□□□ -0.72
P01728 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.58□□□□□ -0.72
P01728 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.58□□□□□ -0.72
P01728 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.58□□□□□ -0.72
P01728 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.58□□□□□ -0.72
P01728 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.58□□□□□ -0.72
P01728 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.58□□□□□ -0.72
P01728 Gm18057-201ENSMUST00000208220 503 ntBASIC10.58□□□□□ -0.72
P01728 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.58□□□□□ -0.72
P01728 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P01728 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.58□□□□□ -0.72
P01728 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.58□□□□□ -0.72
P01728 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01728 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
P01728 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms