Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcnkO88874 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.07□□□□□ -0.48
CcnkO88874 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.06□□□□□ -0.48
CcnkO88874 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.06□□□□□ -0.48
CcnkO88874 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.06□□□□□ -0.48
CcnkO88874 Gm18049-201ENSMUST00000208909 581 ntBASIC12.06□□□□□ -0.48
CcnkO88874 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CcnkO88874 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.06□□□□□ -0.48
CcnkO88874 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcnkO88874 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CcnkO88874 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CcnkO88874 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.05□□□□□ -0.48
CcnkO88874 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.05□□□□□ -0.48
CcnkO88874 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CcnkO88874 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CcnkO88874 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.05□□□□□ -0.48
CcnkO88874 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.05□□□□□ -0.48
CcnkO88874 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.05□□□□□ -0.48
CcnkO88874 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.05□□□□□ -0.48
CcnkO88874 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.05□□□□□ -0.48
CcnkO88874 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.05□□□□□ -0.48
CcnkO88874 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.05□□□□□ -0.48
CcnkO88874 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CcnkO88874 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcnkO88874 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CcnkO88874 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms