Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Syt7-205ENSMUST00000224135 1557 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Cops4O88544 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.49□□□□□ -0.41
Cops4O88544 Gm5264-201ENSMUST00000190584 848 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.49□□□□□ -0.41
Cops4O88544 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.49□□□□□ -0.41
Cops4O88544 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cops4O88544 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.49□□□□□ -0.41
Cops4O88544 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cops4O88544 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.49□□□□□ -0.41
Cops4O88544 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cops4O88544 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.48□□□□□ -0.41
Cops4O88544 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cops4O88544 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cops4O88544 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cops4O88544 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.48□□□□□ -0.41
Cops4O88544 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Rprl2-201ENSMUST00000157150 290 ntBASIC12.48□□□□□ -0.41
Cops4O88544 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cops4O88544 Gm38225-201ENSMUST00000194001 393 ntBASIC12.48□□□□□ -0.41
Cops4O88544 Gm6443-201ENSMUST00000203599 874 ntBASIC12.48□□□□□ -0.41
Cops4O88544 Gm45612-201ENSMUST00000211320 160 ntBASIC12.48□□□□□ -0.41
Cops4O88544 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.48□□□□□ -0.41
Cops4O88544 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.48□□□□□ -0.41
Cops4O88544 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cops4O88544 Gm10175-201ENSMUST00000086013 645 ntBASIC12.48□□□□□ -0.41
Cops4O88544 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cops4O88544 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cops4O88544 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cops4O88544 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cops4O88544 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cops4O88544 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.47□□□□□ -0.41
Cops4O88544 Gm2810-201ENSMUST00000118681 990 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.47□□□□□ -0.41
Cops4O88544 Gm11745-201ENSMUST00000121669 448 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms