Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pde6dO55057 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.66□□□□□ -0.7
Pde6dO55057 Gm29257-201ENSMUST00000186115 639 ntBASIC10.66□□□□□ -0.7
Pde6dO55057 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pde6dO55057 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.66□□□□□ -0.7
Pde6dO55057 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.66□□□□□ -0.7
Pde6dO55057 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pde6dO55057 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pde6dO55057 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pde6dO55057 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pde6dO55057 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pde6dO55057 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Pde6dO55057 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.65□□□□□ -0.7
Pde6dO55057 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pde6dO55057 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pde6dO55057 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.65□□□□□ -0.7
Pde6dO55057 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.65□□□□□ -0.7
Pde6dO55057 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.65□□□□□ -0.7
Pde6dO55057 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pde6dO55057 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pde6dO55057 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.65□□□□□ -0.7
Pde6dO55057 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.65□□□□□ -0.7
Pde6dO55057 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pde6dO55057 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.65□□□□□ -0.7
Pde6dO55057 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pde6dO55057 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pde6dO55057 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.65□□□□□ -0.71
Pde6dO55057 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pde6dO55057 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pde6dO55057 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pde6dO55057 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pde6dO55057 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Pde6dO55057 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.64□□□□□ -0.71
Pde6dO55057 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pde6dO55057 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.64□□□□□ -0.71
Pde6dO55057 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.64□□□□□ -0.71
Pde6dO55057 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Pde6dO55057 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms