Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.11□□□□□ -0.47
NlkO54949 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NlkO54949 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.11□□□□□ -0.47
NlkO54949 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.11□□□□□ -0.47
NlkO54949 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.11□□□□□ -0.47
NlkO54949 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NlkO54949 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.11□□□□□ -0.47
NlkO54949 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.11□□□□□ -0.47
NlkO54949 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.11□□□□□ -0.47
NlkO54949 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NlkO54949 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NlkO54949 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.1□□□□□ -0.47
NlkO54949 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.1□□□□□ -0.47
NlkO54949 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Mir6990-201ENSMUST00000183724 91 ntBASIC12.1□□□□□ -0.47
NlkO54949 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.1□□□□□ -0.47
NlkO54949 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.1□□□□□ -0.47
NlkO54949 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.1□□□□□ -0.47
NlkO54949 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NlkO54949 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
NlkO54949 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.09□□□□□ -0.47
NlkO54949 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NlkO54949 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NlkO54949 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.09□□□□□ -0.47
NlkO54949 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NlkO54949 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms