Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.11■□□□□ 0.17
Smarce1O54941 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Gm2213-201ENSMUST00000197485 688 ntBASIC16.11■□□□□ 0.17
Smarce1O54941 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Smarce1O54941 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.11■□□□□ 0.17
Smarce1O54941 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Smarce1O54941 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.1■□□□□ 0.17
Smarce1O54941 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.1■□□□□ 0.17
Smarce1O54941 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.1■□□□□ 0.17
Smarce1O54941 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.1■□□□□ 0.17
Smarce1O54941 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Smarce1O54941 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarce1O54941 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.1■□□□□ 0.17
Smarce1O54941 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Smarce1O54941 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarce1O54941 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.09■□□□□ 0.17
Smarce1O54941 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.09■□□□□ 0.17
Smarce1O54941 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.09■□□□□ 0.17
Smarce1O54941 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Gm3436-201ENSMUST00000179930 840 ntBASIC16.09■□□□□ 0.17
Smarce1O54941 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smarce1O54941 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smarce1O54941 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms