Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn3O35701 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Matn3O35701 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Gm23935-201ENSMUST00000102303 57 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Gm24270-201ENSMUST00000102326 57 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Gm24245-201ENSMUST00000157318 57 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Mir8117-201ENSMUST00000184773 107 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.3□□□□□ -0.44
Matn3O35701 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.3□□□□□ -0.44
Matn3O35701 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.3□□□□□ -0.44
Matn3O35701 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Matn2-203ENSMUST00000226766 3252 ntBASIC12.3□□□□□ -0.44
Matn3O35701 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Matn3O35701 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Matn3O35701 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Matn3O35701 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Matn3O35701 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn3O35701 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.29□□□□□ -0.44
Matn3O35701 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Matn3O35701 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.29□□□□□ -0.44
Matn3O35701 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.29□□□□□ -0.44
Matn3O35701 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Matn3O35701 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.29□□□□□ -0.44
Matn3O35701 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.29□□□□□ -0.44
Matn3O35701 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.29□□□□□ -0.44
Matn3O35701 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.29□□□□□ -0.44
Matn3O35701 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Matn3O35701 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Matn3O35701 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.29□□□□□ -0.44
Matn3O35701 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn3O35701 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.29□□□□□ -0.44
Matn3O35701 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.28□□□□□ -0.44
Matn3O35701 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.28□□□□□ -0.44
Matn3O35701 Gm15483-201ENSMUST00000120338 456 ntBASIC12.28□□□□□ -0.44
Matn3O35701 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.28□□□□□ -0.44
Matn3O35701 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Matn3O35701 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms