Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nr1i3O35627 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.57□□□□□ -0.08
Nr1i3O35627 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.57□□□□□ -0.08
Nr1i3O35627 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.57□□□□□ -0.08
Nr1i3O35627 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nr1i3O35627 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nr1i3O35627 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Nr1i3O35627 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nr1i3O35627 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nr1i3O35627 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nr1i3O35627 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nr1i3O35627 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm13223-201ENSMUST00000118609 747 ntBASIC14.56□□□□□ -0.08
Nr1i3O35627 Mir7221-201ENSMUST00000184009 72 ntBASIC14.56□□□□□ -0.08
Nr1i3O35627 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm24447-201ENSMUST00000083977 338 ntBASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nr1i3O35627 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.56□□□□□ -0.08
Nr1i3O35627 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1i3O35627 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.55□□□□□ -0.08
Nr1i3O35627 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.55□□□□□ -0.08
Nr1i3O35627 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Gm45841-201ENSMUST00000207700 164 ntBASIC14.55□□□□□ -0.08
Nr1i3O35627 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.55□□□□□ -0.08
Nr1i3O35627 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1i3O35627 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms