Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.87□□□□□ -0.19
Ptch2O35595 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.87□□□□□ -0.19
Ptch2O35595 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.87□□□□□ -0.19
Ptch2O35595 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ptch2O35595 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.87□□□□□ -0.19
Ptch2O35595 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptch2O35595 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ptch2O35595 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Ptch2O35595 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ptch2O35595 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ptch2O35595 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Gm5187-201ENSMUST00000117317 991 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm12403-201ENSMUST00000121384 959 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm27331-201ENSMUST00000183705 60 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ptch2O35595 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.86□□□□□ -0.19
Ptch2O35595 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ptch2O35595 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.86□□□□□ -0.19
Ptch2O35595 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptch2O35595 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
Ptch2O35595 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ptch2O35595 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptch2O35595 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.85□□□□□ -0.19
Ptch2O35595 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptch2O35595 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptch2O35595 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ptch2O35595 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptch2O35595 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.85□□□□□ -0.19
Ptch2O35595 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.85□□□□□ -0.19
Ptch2O35595 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.85□□□□□ -0.19
Ptch2O35595 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.85□□□□□ -0.19
Ptch2O35595 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.85□□□□□ -0.19
Ptch2O35595 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.85□□□□□ -0.19
Ptch2O35595 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.85□□□□□ -0.19
Ptch2O35595 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ptch2O35595 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptch2O35595 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms