Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.42■□□□□ 0.86
Polr1aO35134 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Polr1aO35134 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr1aO35134 Gm7789-202ENSMUST00000211273 1400 ntBASIC20.42■□□□□ 0.86
Polr1aO35134 Mir6927-201ENSMUST00000184494 71 ntBASIC20.41■□□□□ 0.86
Polr1aO35134 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC20.41■□□□□ 0.86
Polr1aO35134 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Polr1aO35134 Gm12217-201ENSMUST00000118858 696 ntBASIC20.41■□□□□ 0.86
Polr1aO35134 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC20.41■□□□□ 0.86
Polr1aO35134 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC20.41■□□□□ 0.86
Polr1aO35134 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC20.41■□□□□ 0.86
Polr1aO35134 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr1aO35134 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Polr1aO35134 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Polr1aO35134 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC20.4■□□□□ 0.86
Polr1aO35134 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC20.4■□□□□ 0.86
Polr1aO35134 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Polr1aO35134 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC20.4■□□□□ 0.86
Polr1aO35134 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr1aO35134 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
Polr1aO35134 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC20.39■□□□□ 0.86
Polr1aO35134 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC20.39■□□□□ 0.86
Polr1aO35134 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Polr1aO35134 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC20.39■□□□□ 0.86
Polr1aO35134 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.86
Polr1aO35134 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Gm8018-201ENSMUST00000173536 789 ntBASIC20.39■□□□□ 0.86
Polr1aO35134 Gm19931-201ENSMUST00000198920 368 ntBASIC20.39■□□□□ 0.86
Polr1aO35134 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC20.39■□□□□ 0.86
Polr1aO35134 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Polr1aO35134 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Polr1aO35134 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Gm10729-202ENSMUST00000193403 1375 ntBASIC20.39■□□□□ 0.85
Polr1aO35134 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Polr1aO35134 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Gm14277-201ENSMUST00000121195 360 ntBASIC20.39■□□□□ 0.85
Polr1aO35134 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC20.39■□□□□ 0.85
Polr1aO35134 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Polr1aO35134 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr1aO35134 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Polr1aO35134 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr1aO35134 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.38■□□□□ 0.85
Polr1aO35134 Gm11930-201ENSMUST00000117788 190 ntBASIC20.38■□□□□ 0.85
Polr1aO35134 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Polr1aO35134 Gm8856-201ENSMUST00000185254 1144 ntBASIC20.38■□□□□ 0.85
Polr1aO35134 Gm9678-201ENSMUST00000198979 1149 ntBASIC20.38■□□□□ 0.85
Polr1aO35134 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC20.38■□□□□ 0.85
Polr1aO35134 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms