Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.47□□□□□ -0.57
Gm3727J3QM54 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.47□□□□□ -0.57
Gm3727J3QM54 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3727J3QM54 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.46□□□□□ -0.57
Gm3727J3QM54 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Paupar-201ENSMUST00000194826 3482 ntBASIC11.46□□□□□ -0.57
Gm3727J3QM54 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Mir874-201ENSMUST00000104769 76 ntBASIC11.46□□□□□ -0.57
Gm3727J3QM54 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.46□□□□□ -0.57
Gm3727J3QM54 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.46□□□□□ -0.57
Gm3727J3QM54 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3727J3QM54 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.46□□□□□ -0.58
Gm3727J3QM54 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.46□□□□□ -0.58
Gm3727J3QM54 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.46□□□□□ -0.58
Gm3727J3QM54 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Gm3727J3QM54 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.45□□□□□ -0.58
Gm3727J3QM54 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gm3727J3QM54 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3727J3QM54 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms