Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3tc1G3X9F6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm13297-201ENSMUST00000120205 934 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm12363-201ENSMUST00000122250 668 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm28693-202ENSMUST00000190758 331 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3tc1G3X9F6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Mospd4-201ENSMUST00000180618 576 ntBASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3tc1G3X9F6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Sh3tc1G3X9F6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Gm22323-201ENSMUST00000103832 109 ntBASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Gm5781-201ENSMUST00000219792 443 ntBASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3tc1G3X9F6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms