Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.7□□□□□ -0.38
Colca2F8VPY8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.7□□□□□ -0.38
Colca2F8VPY8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Gm5523-201ENSMUST00000180415 997 ntBASIC12.7□□□□□ -0.38
Colca2F8VPY8 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.7□□□□□ -0.38
Colca2F8VPY8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.7□□□□□ -0.38
Colca2F8VPY8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm13461-201ENSMUST00000120980 662 ntBASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm15547-201ENSMUST00000122152 333 ntBASIC12.69□□□□□ -0.38
Colca2F8VPY8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Colca2F8VPY8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm27046-201ENSMUST00000182160 463 ntBASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm8959-201ENSMUST00000213150 571 ntBASIC12.69□□□□□ -0.38
Colca2F8VPY8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Colca2F8VPY8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Colca2F8VPY8 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.68□□□□□ -0.38
Colca2F8VPY8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Gm14109-201ENSMUST00000118814 309 ntBASIC12.68□□□□□ -0.38
Colca2F8VPY8 Gm14208-201ENSMUST00000119645 678 ntBASIC12.68□□□□□ -0.38
Colca2F8VPY8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Gm26361-201ENSMUST00000158868 186 ntBASIC12.68□□□□□ -0.38
Colca2F8VPY8 Gm43378-201ENSMUST00000199336 582 ntBASIC12.68□□□□□ -0.38
Colca2F8VPY8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.68□□□□□ -0.38
Colca2F8VPY8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Colca2F8VPY8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms