Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gm16476-201ENSMUST00000221544 139 ntBASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh1F7BJK1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh1F7BJK1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Gm9824-201ENSMUST00000178707 561 ntBASIC12.18□□□□□ -0.46
Pcdh1F7BJK1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms