Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm28693-202ENSMUST00000190758 331 ntBASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm44651-201ENSMUST00000207343 372 ntBASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 AC159103.1-201ENSMUST00000228325 429 ntBASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc85cE9Q6B2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Gm45433-201ENSMUST00000209386 247 ntBASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc85cE9Q6B2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc85cE9Q6B2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Gm11340-201ENSMUST00000119226 412 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Gm17040-202ENSMUST00000170597 889 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Gm7848-201ENSMUST00000210739 718 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Gm32025-201ENSMUST00000217960 307 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Ntng1-201ENSMUST00000051253 327 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc85cE9Q6B2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm44999-201ENSMUST00000207456 1493 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms