Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm13689-201ENSMUST00000119360 685 ntBASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Mir7654-201ENSMUST00000185082 70 ntBASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Cpsf4lE9Q2N0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gm29608-201ENSMUST00000190444 463 ntBASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4lE9Q2N0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms