Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim30cD3YVI9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim30cD3YVI9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim30cD3YVI9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Mir8102-201ENSMUST00000184148 139 ntBASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Gm7775-201ENSMUST00000218871 853 ntBASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim30cD3YVI9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms