Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm23363-201ENSMUST00000175024 79 ntBASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.63□□□□□ -0.23
Col4a6B1AVK5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm11930-201ENSMUST00000117788 190 ntBASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Gm44405-201ENSMUST00000198952 126 ntBASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col4a6B1AVK5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Mir7221-201ENSMUST00000184009 72 ntBASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Gm8385-201ENSMUST00000058999 643 ntBASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col4a6B1AVK5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col4a6B1AVK5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms