Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Gm12266-201ENSMUST00000120311 962 ntBASIC10.85□□□□□ -0.67
Chd6A3KFM7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.85□□□□□ -0.67
Chd6A3KFM7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm15547-201ENSMUST00000122152 333 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm37246-201ENSMUST00000192665 835 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm45500-201ENSMUST00000211676 803 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm9139-201ENSMUST00000218817 700 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm3619-201ENSMUST00000219947 775 ntBASIC10.84□□□□□ -0.67
Chd6A3KFM7 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd6A3KFM7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Chd6A3KFM7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm23251-201ENSMUST00000103773 110 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm7904-201ENSMUST00000217049 465 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm25201-201ENSMUST00000083093 170 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm23949-201ENSMUST00000104027 127 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.83□□□□□ -0.68
Chd6A3KFM7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Chd6A3KFM7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd6A3KFM7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms