Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm10146-201ENSMUST00000072739 309 ntBASIC11.41□□□□□ -0.58
Col6a4A2AX52 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm6222-202ENSMUST00000182143 629 ntBASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Col6a4A2AX52 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.4□□□□□ -0.58
Col6a4A2AX52 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.4□□□□□ -0.58
Col6a4A2AX52 Itm2b-204ENSMUST00000228637 783 ntBASIC11.4□□□□□ -0.58
Col6a4A2AX52 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a4A2AX52 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.4□□□□□ -0.59
Col6a4A2AX52 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a4A2AX52 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm4909-201ENSMUST00000118749 794 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Mir5120-201ENSMUST00000175020 78 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm2383-201ENSMUST00000181461 807 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm27320-201ENSMUST00000184892 109 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm8227-201ENSMUST00000223306 571 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm26315-201ENSMUST00000083890 321 ntBASIC11.39□□□□□ -0.59
Col6a4A2AX52 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms