Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gm15460-201ENSMUST00000118147 391 ntBASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gm14494-201ENSMUST00000118786 435 ntBASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gm12428-201ENSMUST00000119844 727 ntBASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm15467-201ENSMUST00000120582 445 ntBASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm13385-201ENSMUST00000121089 220 ntBASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav12d-1A0N8R0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms