Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm38114-201ENSMUST00000191877 1232 ntBASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm26524-201ENSMUST00000192339 390 ntBASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 AC131586.1-201ENSMUST00000228844 2964 ntBASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Gm3880A0A1B0GSB3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm45532-201ENSMUST00000210342 3620 ntBASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm14117-201ENSMUST00000122417 843 ntBASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm38027-201ENSMUST00000192315 235 ntBASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm44878-201ENSMUST00000205812 1295 ntBASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Rab3c-203ENSMUST00000224180 967 ntBASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Gm26660-202ENSMUST00000223620 4112 ntBASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Gm3880A0A1B0GSB3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms