Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm5425-201ENSMUST00000214125 459 ntBASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm12151-201ENSMUST00000121374 290 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm27989-201ENSMUST00000184721 107 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms