Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 AA619741-201ENSMUST00000195095 646 ntBASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 BC001981-202ENSMUST00000191393 1545 ntBASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav13-4-dv7A0A075B6C2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms