Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Gm12428-201ENSMUST00000119844 727 ntBASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Gm15693-201ENSMUST00000120470 637 ntBASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Gm37935-201ENSMUST00000192012 982 ntBASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Shd-206ENSMUST00000225145 998 ntBASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm14701-201ENSMUST00000117156 348 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm15460-201ENSMUST00000118147 391 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm15653-201ENSMUST00000119247 907 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm27430-201ENSMUST00000184585 107 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm44333-201ENSMUST00000197168 107 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm8396-201ENSMUST00000057361 823 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5-4A0A075B652 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm23935-201ENSMUST00000102303 57 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm24270-201ENSMUST00000102326 57 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm24245-201ENSMUST00000157318 57 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm25948-201ENSMUST00000175334 112 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm27533-201ENSMUST00000183800 152 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm46209-201ENSMUST00000217912 553 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms