Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-5A0A075B604 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.11□□□□□ -0.63
Trav7n-5A0A075B604 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-5A0A075B604 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-5A0A075B604 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Gm9908-201ENSMUST00000211534 448 ntBASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav7n-5A0A075B604 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm12403-201ENSMUST00000121384 959 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7n-5A0A075B604 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms