Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Gm9727-201ENSMUST00000161387 555 ntBASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Mir8117-201ENSMUST00000184773 107 ntBASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk1bQ9Z2C6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Gm5364-201ENSMUST00000216789 889 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk1bQ9Z2C6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.55□□□□□ -0.4
Upk1bQ9Z2C6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms