Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn8aQ9WTU3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms