Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf3Q9QXK7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Gm7287-201ENSMUST00000205267 602 ntBASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Gm5035-201ENSMUST00000215581 927 ntBASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf3Q9QXK7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Gm6244-201ENSMUST00000178732 841 ntBASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.53□□□□□ -0.08
Cpsf3Q9QXK7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms