Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm4875-201ENSMUST00000118257 786 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Gm15393-201ENSMUST00000120499 219 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a2Q9JLR1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a2Q9JLR1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Mir8102-201ENSMUST00000184148 139 ntBASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a2Q9JLR1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms